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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10863948 chr1:212350082 C/T PRHOXNB chr13:28552243-28562774:- 0.57 7.97 1.42E-10 Box Plot
ACC rs10863951 chr1:212352935 A/G PRHOXNB chr13:28552243-28562774:- 0.57 7.97 1.42E-10 Box Plot
ACC rs10867920 chr9:85603327 A/C TFDP3 chrX:132350697-132352376:- 0.91 9.79 2.13E-13 Box Plot
ACC rs10919946 chr1:200456424 G/A PRHOXNB chr13:28552243-28562774:- 0.58 7.55 6.64E-10 Box Plot
ACC rs10955602 chr8:112825223 C/A KRT6C chr12:52862300-52867569:- 0.65 9.01 3.29E-12 Box Plot
ACC rs10968141 chr9:2792324 T/C PRHOXNB chr13:28552243-28562774:- 0.74 11.52 6.27E-16 Box Plot
ACC rs11036556 chr11:41809709 G/C PRHOXNB chr13:28552243-28562774:- 0.68 9.13 2.22E-12 Box Plot
ACC rs11110964 chr12:102089392 T/A C19orf75 chr19:51754332-51772582:+ 1.64 8.06 1.01E-10 Box Plot
ACC rs11119869 chr1:212349064 C/T PRHOXNB chr13:28552243-28562774:- 0.57 7.97 1.42E-10 Box Plot
ACC rs11119870 chr1:212352187 G/A PRHOXNB chr13:28552243-28562774:- 0.57 7.97 1.42E-10 Box Plot
ACC rs11119871 chr1:212352368 C/T PRHOXNB chr13:28552243-28562774:- 0.57 7.97 1.42E-10 Box Plot
ACC rs111641148 chr1:167878794 AT/A PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot
ACC rs111645810 chr15:84771249 G/T MAL chr2:95691422-95719741:+ 1.5 7.75 3.12E-10 Box Plot
ACC rs111698844 chr7:17263911 A/G TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs111826016 chr3:116069472 C/CT OR6C3 chr12:55725485-55726420:+ 0.99 7.81 2.55E-10 Box Plot